Human DLPFC sample profiled using the 10x Visium platform. Lowly expressed genes were filtered out using the filterGenes function to retain genes expressed in at least 10% of samples. This version was obtained from the SpatialLIBD R/Bioconductor package.
A SpatialExperiment containing region annotations in the colData column 'AnnotatedCluster'.
Source
SpatialLIBD R/Bioconductor package.
References
Maynard KR, Collado-Torres L, Weber LM, Uytingco C, Barry BK, Williams SR, Catallini JL, Tran MN, Besich Z, Tippani M, Chew J. Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex. Nature neuroscience. 2021 Mar;24(3):425-36.