spatial

vissE.cloud: a webserver to visualise higher order molecular phenotypes from enrichment analysis
vissE.Cloud is a web-server that can help identify, visualise and explore higher-order biological processes from the results of a gene-set enrichment analysis (GSEA). It provides end-to-end analysis of scRNA-seq (10x Chromium) and spatial transcriptomics (10x Visium, 10x Xenium, and NanoString CosMx) datasets.
Ahmed Mohamed, Dharmesh D Bhuva, Sam Lee, Ning Liu, Chin Wee Tan, Melissa J Davis
Cite Code DOI Web tool Bioconductor Workshop
vissE.cloud: a webserver to visualise higher order molecular phenotypes from enrichment analysis
vissE: A versatile tool to identify and visualise higher-order molecular phenotypes from functional enrichment analysis
vissE is a tool that can help identify, visualise and explore higher-order biological processes from the results of a gene-set enrichment analysis (GSEA)
Dharmesh D Bhuva, Chin Wee Tan, Ning Liu, Holly J Whitfield, Nicholas Papachristos, Sam Lee, Malvika Kharbanda, Ahmed Mohamed, Melissa J Davis
PDF Cite Code DOI Web tool Bioconductor Workshop
vissE: A versatile tool to identify and visualise higher-order molecular phenotypes from functional enrichment analysis