breast cancer

Differential co-expression-based detection of conditional relationships in transcriptional data: comparative analysis and application to breast cancer
dcanr is a method that helps infer differential regulatory networks from high-througput ‘omics data
Dharmesh D Bhuva, Joseph Cursons, Gordon K Smyth, Melissa J Davis
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Differential co-expression-based detection of conditional relationships in transcriptional data: comparative analysis and application to breast cancer
Single sample scoring of molecular phenotypes
singscore is a robust rank-based method to compute molecular phenotypes scores for individual samples such as those originating from an individual patient in the clinic
Momeneh Foroutan, Dharmesh D Bhuva, Ruqian Lyu, Kristy Horan, Joseph Cursons, Melissa J Davis
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Single sample scoring of molecular phenotypes